BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E02SP1|AL430235
(932 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig821 1759 0.0
>3x_Contig821
Length = 3127
Score = 1759 bits (886), Expect = 0.0
Identities = 902/906 (99%), Gaps = 2/906 (0%)
Strand = Plus / Minus
Query: 29 ttgagatttgataggcattttcaacgtccaactctccttcttttcagatctgttatttcc 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3127 ttgagatttgataggcattttcaacgtccaactctccttcttttcagatctgttatttcc 3068
Query: 89 aaatcattacgattttatcattaccaaattaaactatattttactaatactatgtcctag 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3067 aaatcattacgattttatcattaccaaattaaactatattttactaatactatgtcctag 3008
Query: 149 taccatccgtataaaccatctttctgatttcctaactaaagatatgttagtgaagtatat 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3007 taccatccgtataaaccatctttctgatttcctaactaaagatatgttagtgaagtatat 2948
Query: 209 tggatctctttctgaggagtctaccgaattcaaagaattatgtaactgtttgcctgagga 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2947 tggatctctttctgaggagtctaccgaattcaaagaattatgtaactgtttgcctgagga 2888
Query: 269 tgtcgaaaagggaaaagaaaaccttttgaaatgtgtaagaggtccattctttcagcaagc 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2887 tgtcgaaaagggaaaagaaaaccttttgaaatgtgtaagaggtccattctttcagcaagc 2828
Query: 329 agttgac-attttggacttagctacgaagcagagctattcgggacaacaactctcacaaa 387
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2827 agttgaccattttggacttagctacgaagcagagctattcgggacaacaactctcacaaa 2768
Query: 388 tgtttggatattcgtataccggagaaggaccacgagctctactggraggacttagaaata 447
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2767 tgtttggatattcgtataccggagaaggaccacgagctctactggaaggacttagaaata 2708
Query: 448 agggcctccaggaaaagctaaagaagcaagattcacaatcagaataagaaaatggaaaca 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2707 agggcctccaggaaaagctaaagaagcaagattcacaatcagaataagaaaatggaaaca 2648
Query: 508 aaattaatactgaccgttggcagcagctggtaaataagtatctacataagatttttaatg 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2647 aaattaatactgaccgttggcagcagctggtaaataagtatctacataagatttttaatg 2588
Query: 568 gaccacttatatatgagaataaatataggtatatatgtgggagaagatggttgttaagcc 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2587 gaccacttatatatgagaataaatataggtatatatgtgggagaagatggttgttaagcc 2528
Query: 628 tgactagtcccatctgacagcccagtgtaactcatctccagctttgaatggagcaactct 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2527 tgactagtcccatctgacagcccagtgtaactcatctccagctttgaatggagcaactct 2468
Query: 688 gaggccttttccatcagtgattatttctgggatattagttgtctttttgaagactgtaac 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2467 gaggccttttccatcagtgattatttctgggatattagttgtctttttgaagactgtaac 2408
Query: 748 gttttggttggacttgatgtcttctggtttcaatgcataaaatgataatggtgcatcgct 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2407 gttttggttggacttgatgtcttctggtttcaatgcataaaatgataatggtgcatcgct 2348
Query: 808 tacg-agttctttaaagtgtccagttttccttgagtttcgaatatttcagccaggtatgg 866
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2347 tacgaagttctttaaagtgtccagttttccttgagtttcgaatatttcagccaggtatgg 2288
Query: 867 aattgccagcgattgcgaaaacacaccggcacatacgcctacatgtttwgctttattttc 926
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2287 aattgccagcgattgcgaaaacacaccggcacatacgcctacatgtttagctttattttc 2228
Query: 927 tatcgg 932
||||||
Sbjct: 2227 tatcgg 2222
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7552
Number of Sequences: 1807
Number of extensions: 7552
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)